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Bioinformatics and Deliverables

Our bioinformatics services include below analysis, deliverables and data management.

Analysis

QC and bioinformatics analysis is done in Illuminas Genome Studio software.

Deliverables

  • Excel file summarizing information about the experimental setup and methods (MIAME.xls)
  • 5 folder:DecodeData – files used during scanning.
  • GenomeStudio – executable file (.bsc) for the created GenomStudio project.
  • ImageData – scanned image files and data extracted from corresponding image file.
  • LTW – lab Tracking Works sheet (.xlsx)
  • SamplesSheet – sample information used to create genome Studio project (csv-file). 

Data management and analysis

  • CTG uses LUNARC, center for scientific and technical computing at Lund University facility, for data management and analysis. 

Delivery medium

  • Your project data will be delivered through external hard drive provided by CTG.

Data storage

  • The project data will be stored for 6 months.

Additional Services

  • For additional Bioinformatics services please contact NBIS – National Bioinformatics Infrastructure Sweden, (https://nbis.se/).

Contact for service

E-mail:CTGservice [at] med [dot] lu [dot] se (CTGservice[at]med[dot]lu[dot]se)

Ingrid Wilson
  Phone: +46 - (0) 46-222 04 44

Scientist reaching for a pipette.